For most current lab publications, head to Angela’s google scholar profile: https://scholar.google.com/citations?user=hLRSBUkAAAAJ&hl=en&oi=ao

34.	Rappaport HB, Petek-Seoane NA, Tyml T, Mikus F, LaButti K, Ani G, Niblo JK, MacVicar E, Shepherd RM, de la Higuera I, Lord SJ, Dey G, Wolfe GV, Dudin O, Sukenik S, Katz LA, Stedman KM, Skruber K, Schulz F, Mullins RD, Oliverio AM. A geothermal amoeba sets a new upper temperature limit for eukaryotes. preprint: bioRxiv. 2025 Nov 24:2025-11.
33.	Cuesta-Maté A, Bret TP, Duchêne DA, Oliverio AM, Shik JZ, Andersen SB, Dunn RR, Rodríguez JA, Sinotte VM. Evolutionary genomics reveals plant origins of acetic acid bacteria in fermented food. preprint: bioRxiv. 2025 Jul 14:2025-07.
32.	Rocci KS, Pierson D, Jevon FV, Polussa A, Oliverio AM, Bradford MA, Reich PB, Wieder WR. Integrating Microbial Community Data Into an Ecosystem‐Scale Model to Predict Litter Decomposition in the Face of Climate Change. Global change biology. 2025 Jul;31(7):e70352.
31.	Shepherd RM, Oliverio AM. The Biogeography of Apicomplexan Parasites in Tropical Soils. Ecology and Evolution. 2025 Jun;15(6):e71478.
30.	Bechtold EK, Ellenbogen JB, Villa JA, de Melo Ferreira DK, Oliverio AM, Kostka JE, Rich VI, Varner RK, Bansal S, Ward EJ, Bohrer G. Metabolic interactions underpinning high methane fluxes across terrestrial freshwater wetlands. Nature Communications. 2025 Jan 22;16(1):944.
29.	Lepper JA, Rappaport HB, Oliverio AM. Half of microbial eukaryote literature focuses on only 12 human parasites. The ISME Journal. 2025 Jan;19(1):wraf219.
28.	Arrigan D, Kothe CI, Oliverio AM, Evans JD, Wolfe BE. Novel fermentations integrate traditional practice and rational design of fermented-food microbiomes. Current Biology. 2024 Nov 4;34(21):R1094-108.
27.	Rappaport HB, Senewiratne NPJ, Lucas SK, Wolfe BE, Oliverio AM. Variation in the genome content of acetic acid bacteria shapes emergent function of sourdough starter microbiomes. mSystems
26.	Rappaport HB, Oliverio AM. (2024). Lessons from Extremophiles: Functional Adaptations and Genomic Innovations across the Eukaryotic Tree of Life. Genome Biology and Evolution, 16(8), evae160. [Link]
25.	Polussa A, Ward EB, Bradford MA & Oliverio AM (2024). A common ericoid shrub modulates the diversity and structure of fungal communities across an arbuscular to ectomycorrhizal tree dominance gradient. FEMS Microbiology Ecology, fiae092. [Link]
24.	Shepherd RMS & Oliverio AM (2024). Micronutrients modulate the structure and function of soil bacterial communities. Soil Biology and Biochemistry, 109384. [Link]
23.	Oliverio AM, Narrowe AB, Villa JA, Rink C, Hoyt DW, Liu P, McGivern BB, Bechtold EK, Ellenbogen JB, Daly RA, Smith GJ, Angle JC, Flynn RM, Freiburger AP, Louie KB, Stemple B, Northen T, Henry C, Miller C, Morin TH, Bohrer G, Borton MA, and Wrighton KC. (2024) Rendering the metabolic wiring powering wetland soil methane production. Preprint: https://doi.org/10.1101/2024.02.06.579222
22.	Rappaport, HB, & Oliverio, AM (2023). Extreme environments offer an unprecedented opportunity to understand microbial eukaryotic ecology, evolution, and genome biology. Nature Communications, 14(1), 4959. [Link]
21.	Bradford MA, Veen GC, Bradford EM, Covey KR, Crowther TW, Fields N, … Oliverio AM, … & Maynard, D. S. (2023). Coarse woody debris accelerates the decomposition of deadwood inputs across temperate forest. Biogeochemistry, 1-19. [Link]
20.	Rodriguez-Ramos JA, Oliverio AM, Borton MA, Danczak RE, Mueller BM, Schulz H, Ellenbogen J, Flynn RM, Daly RA, Schopflin L, Shaffer M., and Wrighton KC. (2023) Spatial and temporal metagenomics of river compartments reveals viral community dynamics in an urban impacted stream. Frontiers in Microbiomes, 2, 1199766. [pdf]
19.	Madden AA*, Oliverio AM*, Kearns PJ, Henley JB, Fierer N, Starks PT, … & Lattin, C. R. (2022). Chronic stress and captivity alter the cloacal microbiome of a wild songbird. Journal of Experimental Biology, 225(7), jeb243176. [Link] * denotes authors contributed equally to this work
18.	Webster TM, McFarland A, Gebert MJ, Oliverio AM, Nichols L, Dunn RR, Hartmann EM, & Fierer N. The structure and functional attributes of bacterial communities in premise plumbing across the United States. (2021) Environmental Science and Technology. [Link]
17.	Ellis, J, Karl JP, Oliverio AM, Fu X, Soares J, Wolfe BE, Hernandez C, Mason J, & Booth S (2021). Dietary vitamin K is remodeled by gut microbiota and influences community composition. (2021) Gut Microbes.
16.	Landis EA*, Oliverio AM*, McKenney EA, … Dunn RR, Fierer N, & Wolfe BE (2021). The diversity and function of sourdough starter microbiomes. eLife, 10:e61644. [pdf] * denotes authors contributed equally to this work
15.	Oliverio AM, Bissett A, McGuire K, Turner BL, Fierer N. (2020) Changes in soil bacterial taxa and their functional attributes across natural gradients in P availability. mBio, 11(5) e01718-20. [pdf]
14.	Oliverio AM, Geisen S, Delgado-Baquerizo M, Maestre FT, Turner BL, Fierer N. The global-scale distributions and ecological preferences of soil protists (2020) Science Advances, 6(4), eaax8787. [pdf]
13.	Gebert MJ, Delgado-Baquerizo M, Oliverio AM, Webster T, Nichols L, Honda J, Adjemian J, Dunn RR, & Fierer N (2018) Ecological analyses of mycobacteria in showerhead biofilms and their relevance to human health. mBio, 9(5), e01614-18. [pdf]
12.	Oliverio AM, Gan H, Wickings K, Fierer N (2018) A DNA metabarcoding approach to characterize soil arthropod communities. Soil Biology and Biochemistry. 125, 37-43. [pdf]
11.	Washburne AD, Morton JT, Sanders J, McDonald D, Zhu Q, Oliverio AM & Knight R (2018) Methods for phylogenetic analysis of microbiome data. Nature Microbiology, 3(6), 652. [pdf]
10.	Oliverio AM, Power JF, Washburne A, Cary SC, Stott MB & Fierer N (2018) The ecology and diversity of microbial eukaryotes in geothermal springs. The ISME Journal, 1. [pdf]
9.	Delgado-Baquerizo M, Oliverio AM, Brewer T, Benavent-Gonzáles A, Eldridge DJ, Bardgett RD, Maestre RT, Singh BK & Fierer N. (2018) A global atlas of the dominant bacteria found in soil. Science, 6373(359) 320-325. [pdf]
8.	McKenzie VJ, Song SJ, Delsuc F, Prest TL, Oliverio AM, … Knight R. (2017) The effects of captivity on the mammalian gut microbiome. Integrative and Comparative Biology, 57(4), 690-704. [article]
7.	Oliverio AM, Bradford MA, & Fierer N. (2017). Identifying the microbial taxa that consistently respond to soil warming across time and space. Global Change Biology, 23(5), 2117-2129. [pdf]
6.	Turbek S, Chock T, Donahue K, Havrilla C, Oliverio AM, Plutchko S, Shoemaker L, and Vimercati L (2016). Scientific Writing Made Easy: A Step-by-Step Guide to Undergraduate Writing in the Biological Sciences. Bulletin of the Ecological Society of America.  [pdf]
5.	Oliverio AM, Lahr DJ, Grant J, & Katz LA (2015). Are microbes fundamentally different than macroorganisms? Convergence and a possible case for neutral phenotypic evolution in testate amoeba (Amoebozoa: Arcellinida). Royal Society Open Science, 2(12), 150414. [article]
4.	Oliverio AM, Lahr DJ, Nguyen T, & Katz LA (2014). Cryptic Diversity within Morphospecies of Testate Amoebae (Amoebozoa: Arcellinida) in New England Bogs and Fens. Protist, 165(2), 196-207. [article]
3.	Oliverio AM, & Katz LA (2014). The dynamic nature of genomes across the tree of life. Genome biology and evolution, 6(3), 482-488.  [article]
2.	Grattepanche JD, Santoferrara LF, Andrade J, Oliverio AM, McManus, G. B., & Katz, LA (2014). Distribution and diversity of oligotrich and choreotrich ciliates assessed by morphology and DGGE in temperate coastal waters. Aquatic Microbial Ecology, 71, 211-221.  [pdf]
1.	Lahr DJ, Laughinghouse HD, Oliverio AM, Gao F, & Katz LA (2014). How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth. BioEssays, 36(10), 950-959. [article]